GWAS Annotated: NEGR1

Gene: neuronal growth regulator 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
NEGR1GH01J071407-None0.0000Enhancer63-Distancechr1:71407130-71407386--
NEGR1GH01J071413-1:71414333:C:T0.5828Enhancer1-Distancechr1:71413416-71414473ENSR1_BJ6MW
FOSSPI1
NEGR1GH01J071462-1:71462533:TAGA:T1.6913Enhancer71-Distancechr1:71462417-71462547-
NANOGEP300EGR1SP1CHD7TCF12HDAC2JUNDBCL11A
NEGR1GH01J071617-1:71618864:G:T1.2906Enhancer1-Distancechr1:71617985-71619174--
NEGR1GH01J071619-None0.0000Enhancer1-Distancechr1:71619217-71619367--
NEGR1GH01J071621-1:71622030:G:A0.4955Enhancer36-Distancechr1:71621797-71622320ENSR1_933FJX
RCOR1FOSMYCJUNDBHLHE40CEBPBMAFK
NEGR1GH01J071640-None0.0000Enhancer1-Distancechr1:71640197-71640347-
EP300
NEGR1GH01J071642-1:71642540:G:T0.1192Enhancer9-Distancechr1:71642490-71642558--
NEGR1GH01J071649-1:71650091:TGATACTGCA:T1.1580Enhancer1-Distancechr1:71649406-71651081ENSR1_933FT6
GATA3GATA2
NEGR1GH01J071690-1:71690336:T:C1.0335Enhancer9-Distancechr1:71690172-71690505--
NEGR1GH01J071705-1:71705814:GAGAA:G0.9548Enhancer56-Distancechr1:71705617-71706851ENSR1_BJ886, ENSR1_5LTDCJ
CTCFRCOR1RAD21
NEGR1GH01J071732-1:71732524:G:A0.6007Enhancer1-Distancechr1:71732497-71732647--
NEGR1GH01J071785-1:71785903:G:A0.1028Enhancer1-Distancechr1:71785010-71786043ENSR1_933HBB
GATA3GATA2
NEGR1GH01J071868-None0.0000Enhancer6-Distancechr1:71868438-71868607--
NEGR1GH01J071881-1:71882726:G:GA0.8188Enhancer56-Distancechr1:71881476-71882899ENSR1_BJ96L
GATA1SPI1
NEGR1GH01J072000-None0.0000Enhancer118EliteDistancechr1:72000620-72001331ENSR1_933KLL
GATA1ZNF687YY1ZNF592
NEGR1GH01J072034-1:72034692:G:A0.4486Enhancer56-Distancechr1:72034561-72035411-
NANOGTCF12MYCYY1
NEGR1GH01J072100-None0.0000Promoter94-Distancechr1:72100934-72100994NEGR1_3
SPI1
NEGR1GH01J072121-1:72122436:A:G3.8589Enhancer36-Distancechr1:72121879-72123108ENSR1_BJBGD
EP300CEBPB
NEGR1GH01J072220-None0.0000Enhancer9-eRNA_co-expression,Distancechr1:72220802-72220938--
NEGR1GH01J072281-1:72280279:A:G2.6585Enhancer1-Distancechr1:72280000-72280400-
FOXA2
NEGR1GH01J072280-1:72282884:G:GTCCT3.8548Promoter/Enhancer690EliteeRNA_co-expression,Distancechr1:72280911-72287038ENSR1_933NLQ, ENSR1_BJCBL, ENSR1_5M235K, ENSR1_933NMD, ENSR1_5M23B3, ENSR1_933NMH, ENSR1_933NMQ, NEGR1_2, NEGR1_1
CTCFCEBPBSMC3RAD21SPI1CTCFZNF512BPHB2CTBP1MXI1SUZ12POLR2AASH2LRAD21KDM4ACTCFPHF8ZNF143RBBP5ZNF384EGR1EZH2TAF1RAD21ESR1TAF7CHD1POLR2ATBPHNRNPKEP300JUNDYY1SMARCA4MXI1HNRNPLLRFX1CEBPBRESTBMI1ASH2LSIN3AHDAC2MAFKSAP30SMC3RBM39YY1TAF7SUZ12L3MBTL2EP300MXI1NRF1GATA2BHLHE40STAT3TBPXRCC5KDM4AYY1HNRNPKPKNOX1ASH2LCTCFRAD21SPI1SMC3MXI1GATA2TAF1EEDIKZF2CBFBSTAT5AZBED1TBPARID3AGABPASKILCBX5ATF2ETV6PAX5CREMIRF4RUNX3JUNBEP300CEBPBBCL11ASTAT3NFICTCF7BATFFOSJUNDBHLHE40MYCESR1GATA2NFE2L2CTCFRAD21