GWAS Annotated: MRPL39

Gene: mitochondrial ribosomal protein L39

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
MRPL39GH21J025417-None0.0000Enhancer53-eRNA_co-expressionchr21:25417405-25417494--
MRPL39GH21J025420-21:25423911:G:A1.2242Enhancer329EliteeQTLs,eRNA_co-expressionchr21:25420926-25425758ENSR21_B737W, ENSR21_57ZG33
SMAD5SRFMLLT1CBFBCTCFYY1NFICEEDPOLR2AEP300NBNEBF1TBPNFATC1MXI1EZH2WRNIP1PAX5KLF5TCF12ETV6TBL1XR1RELBSIN3ARB1CHD1MAXRUNX3PKNOX1ELK1BHLHE40RFX5SPI1MTA3CTCFZNF384E2F4ZNF207SMAD1ZNF143RAD21TAF1YY1ATF7SMC3TRIM22ATF2RXRASMAD5MLLT1POLR2AYY1SMAD5CUX1JUNBPKNOX1NFICMEF2AMEF2CTBPNFATC1BATFMLLT1NBNATF7TBX21POLR2ASMAD1TRIM22NFICTBPTAF1RUNX3BCL11AMEF2ACHD1SPI1RELBPAX5IKZF1POLR2ATAF1TBPSMC3EBF1TBL1XR1EP300ATF7TBX21RUNX3MEF2CMEF2AIRF4NFICJUNBEEDCREMBATFYY1POLR2APKNOX1EBF1
MRPL39GH21J025451-21:25451902:C:T0.2663Enhancer46-eQTLschr21:25451690-25451991ENSR21_9D4QK
FOSBHLHE40CEBPBMAFK
MRPL39GH21J025456-21:25456498:C:T0.3390Enhancer350EliteeQTLschr21:25456240-25458882ENSR21_B73DZ, ENSR21_B73F4
MLLT1ASH2LTRIM22YY1SMAD1RUNX3ZNF384CBFBEEDEP300BCL3TBX21RFX5EBF1CREMSMC3TAF1PAX5BHLHE40NRF1CUX1BCL11ABATFPOLR2AIKZF1RELBNFICCHD1ATF7EEDRCOR1JUNDJUNBCUX1TBL1XR1TBX21TBPEBF1ETV6ATF2RUNX3TCF7EP300BHLHE40STAT3MXI1SMAD1KLF5MTA3PAX5FOSSTAT5ASPI1RAD21NFATC1BATFETS1E2F8MEF2ACREMZBED1MYCIRF4TRIM22CBFBRXRABCL11ATCF12ZNF384BCL3SRFSMC3MEF2CNBNMTA3ZNF207POLR2A
MRPL39GH21J025461-21:25462680:A:G0.8011Enhancer229EliteeQTLs,eRNA_co-expressionchr21:25461429-25463131-
PKNOX1NFATC1POLR2AATF2MTA3CREMTBL1XR1SMC3RUNX3NBNTBX21ATF7PKNOX1SMAD1MLLT1KLF5EEDTRIM22TAF1BHLHE40HCFC1YY1SPI1ZBED1NFYBMXI1ZNF384TBP
MRPL39GH21J025463-21:25464165:G:A0.8318Enhancer241EliteeQTLschr21:25463884-25464888-
MTA3NBNZBED1STAT5ARELBEP300NFATC1JUNDETV6EEDJUNBTCF7MEF2AMEF2CCREMBCL3PBX3IRF4TBX21BCL11ASMAD5FOSNFICATF2BATFATF7RUNX3TBPTAF1ZNF207MLLT1CHD1YY1SIN3APKNOX1STAT3SMC3
MRPL39GH21J025486-21:25486992:T:C0.8877Enhancer274EliteeQTLschr21:25486845-25487610ENSR21_9D55S
FOXA1ZBTB40PAX5ARID3AIKZF1SMAD5NBNMLLT1SMC3SPI1MEF2BNFICGATAD2BRELBJUNBZNF592RUNX3IKZF2MTA2ATF2ZNF384BHLHE40TBX21GABPAATF7EP300ZNF217ELF1PAX5SRFZNF687ESRRADPF2SMAD1STAT5ATCF12NFATC1MEF2CNFATC3MTA3BATFJUNDEBF1PKNOX1CBFBBCL11ACREMEEDKLF5IRF4ZBTB33BCL3ZBED1TCF7BMI1PBX3TRIM22ETV6BACH1MEF2ASKILARNTRAD21ARID3A
MRPL39GH21J025554-21:25556160:C:A0.3047Enhancer1-eQTLschr21:25554336-25556431-
CEBPB
MRPL39GH21J025561-21:25561626:A:T1.0704Promoter/Enhancer556EliteeQTLschr21:25561203-25564159ENSR21_B73Z6, ENSR21_582C4D, ENSR21_9D5XJ, ENSR21_8Q9WT, JAM2_1
CHD1CTCFWRNIP1TBX21POLR2AMLLT1TAF1EEDSPI1RAD21TBL1XR1ZNF384RBBP5NFICETV6GATA2TBPCREMJUNBIRF4FOSPCBP1HDAC2EEDJUNDTAF1MEF2CSMAD5HNRNPKATF2BHLHE40STAT5AZBED1BATFYY1TCF12RUNX3TRIM22EZH2NFATC1ZNF143MEF2ASRFRAD21POU2F2SPI1ZNF207PHF8MLLT1CBFBETS1CHD1STAT1MTA3RXRAPAX5ZBTB33BCL3MAXIRF3RB1KDM1AMYCKLF5KDM4AHSF1SMAD1TCF7WRNIP1ZBTB33SMAD5ATF2SMAD1CREMSTAT5ARESTGATA2SMAD5NFICCHD1HDAC6NFATC1RB1STAT5AMTA3ETS1TBL1XR1MXI1MAXEEDRUNX3CUX1TRIM22ATF7STAT3RELBCBFBETV6ELK1YY1TBX21TCF12TBPPOU2F2PAX5SMAD1WRNIP1BCL3BCL11AEP300ZBTB33NBNEZH2ATF2CREMKLF5TCF7MEF2AZBED1TAF1BATFSRFZNF384CHD1POU2F2
MRPL39GH21J025567-21:25567212:C:G0.3186Enhancer267EliteeQTLschr21:25567148-25568867ENSR21_582D32, ENSR21_9D629
MLLT1POLR2AMTA3STAT5ATBL1XR1RB1TBPWRNIP1NBNCREMRUNX3CBFBCTCFNFATC1ZBED1STAT5APOU2F2PAX5RAD21SMC3ZBTB33SMAD5TBX21NFICNFATC1PAX5NR2F2FOSYY1EEDBCL3ZBED1RUNX3WRNIP1TAF1MTA3RXRATBPSTAT5ACTCFPOU2F2RELBCREMSMAD5ZNF207MAFKMEF2ASPI1CHD1
MRPL39GH21J025571-21:25570175:TAGAG:T0.0815Enhancer133EliteeQTLschr21:25570108-25570258-
POLR2AZBED1NFATC1CBFBSMAD5CREM
MRPL39GH21J025570-21:25574790:T:C1.2811Enhancer321EliteeQTLschr21:25570847-25575610ENSR21_C4JHX
CBFBPOLR2ANBNMLLT1EEDSMAD1ATF7SMAD5RUNX3TBPRELBSMAD5BCL3POU2F2NFATC1SMAD5CHD1CUX1TRIM22ZNF384NFATC1JUNBRELBNFICNBNMEF2APKNOX1NFATC1PAX5RUNX3TBX21BCL3ATF7RCOR1SMAD5TCF7POLR2AMLLT1MTA3ATF2TBPEP300BHLHE40MEF2CEEDCREMETS1ETV6BCL11ABATFSTAT5ASMC3ZNF384CHD1MLLT1CBFBATF2NBNPKNOX1POLR2ATBX21ZBED1SMC3SMAD5MEF2ARUNX3MXI1PAX5CTBP1ATF7EEDRCOR1TAF1KDM1ARB1DACH1BCL3RNF2SPI1CREMBHLHE40SIN3ABATFPBX3HDAC1IRF4ETV6FOSDPF2MAXCTCFCBFA2T3ATF3SMARCA4SOX6CHD1TEAD4HMBOX1CREB1NFICJUNBSTAT3POU2F2ARID3AFOSL2CEBPBMYCSMARCE1JUNJUNDEGR1ARID1BBCL11AFOXA1NFE2FOSL1GATA3RAD21GATA2SMAD5POLR2AEP300SMAD5POU2F2
MRPL39GH21J025576-21:25577360:G:A0.3617Enhancer173-eQTLschr21:25576988-25579106ENSR21_8QB86
POLR2ACBFBSTAT5ACREMMLLT1RUNX3BCL3ATF2NBNZBED1POU2F2ZNF207NFATC1BATFSPI1SMAD5RXRAETS1TAF1MEF2AATF2STAT5AMTA3TCF7ZBED1EEDRUNX3CREMSMARCA4SPI1KDM1AZBTB33SOX6ESRRANR2F2MEIS2BCL3HDAC1CTBP1NR2F6RUNX1NFICLEF1MLLT1ATF4TAL1CBFA2T3JUNDARID1BGATA1NR2F1ATF3TEAD4TCF12CBFBJUNBE2F8MEF2CETS1YY1PBX3POU2F2PAX5IRF4BCL11ABATFZBTB33MEF2CETS1RAD21SUZ12RXRATCF7MEF2AMEF2C
MRPL39GH21J025580-21:25580451:G:A0.0418Enhancer106-eQTLschr21:25580137-25580508-
NFATC1NFICCUX1STAT5ARUNX3ATF2POLR2AZBED1SMAD5BCL3POU2F2MTA3E2F8BMI1BCL3NFIC
MRPL39GH21J025584-21:25584436:C:T0.0945Enhancer72-eQTLs,Distancechr21:25584367-25585027-
ATF2BCL3POLR2ARCOR1MTA3SMC3BCL3RUNX3STAT5AATF2
MRPL39GH21J025588-21:25588283:G:A0.3068Enhancer14-eQTLs,Distancechr21:25588211-25588466-
POLR2A
MRPL39GH21J025590-21:25591094:A:C0.1264Enhancer70-eQTLs,Distancechr21:25590632-25591334--
MRPL39GH21J025606-21:25608378:G:A2.0261Promoter/Enhancer600EliteeQTLs,Distancechr21:25606507-25608930ENSR21_73HMPC, ENSR21_582LTP, ENSR21_C4JLG, ENSR21_582M2M, MRPL39_1
NFICMYCEZH2KDM5ABHLHE40WRNIP1RBFOX2FUSHDAC2NR2F6BRD4PHF8POLR2GSIN3ARELBPOLR2AGABPB1AGO1ZFXHDAC1DPF2PCBP1SMARCC2MTA2ASH2LC11orf30CLOCKZNF263L3MBTL2CREMNFRKBSMAD5RESTTAF9BARNTPMLBRD9IKZF1EHMT2MXI1LEF1TAF15NR2F1ZBTB40RBBP5MTA3ZBTB11MNTMLLT1NFATC1AFF1PKNOX1NRF1NCOA1TCF12TAF1ZSCAN29PHF20SETDB1CREB3L1SREBF2TRIM28MEF2BCBFBFIP1L1U2AF1GATA4HNRNPLRBM22ZNF444PRPF4IKZF2SIN3BSP1CTCFKDM5BNFATC3ZNF639GATA3RB1KDM4BNBNZNF217YY1ETS1SKIPTBP1CTBP1ZNF282SKILATF2MBD2ZHX2NCOA4ZNF512BE2F1ELF1NCOR1CUX1EP400ETV6CHD1TRIM22HNRNPUL1GATAD2BETV4NFICCHD4CDC5LSMARCA4TAF7MIER1RNF2MAXSIX5E2F8GMEB1TBX21RFX1MEIS2ZNF687ZNF184TAL1ELF4NCOA6TBPARID1BEP300MGARCOR1PHF21AGABPARBM39KLF5TBL1XR1XRCC5FOXM1IRF1CBX3MITFFOXK2ASH1LZFP91STAT1ZNF207CC2D1AHCFC1SOX6MYCJUNDSPI1TRIM24TBX3SMAD1ARID3ASMARCA5HDAC3ZKSCAN1TFAP4STAT5ABCL3TCF7TRIP13ZEB2RLFE4F1MTA1ZBTB2IRF2FOSL2HNRNPLLGATAD2ATEAD4RFX5IRF4POU2F2ZBTB7BMYNNCHAMP1RAD21BACH1BHLHE40RUNX1ZNF384THAP1PAX5JUNEGR1CREB1ZHX1ZBTB33RXRAESR1CBX5STAT2RUNX3NR3C1ZNF143E2F6BATFSRFZNF24KDM1AIRF3ZMYM3MAFKUSF1SMC3ZNF592FOXA1ATF3NR2C1ELK1BMI1PBX3CBX1ZEB1BCORZMIZ1UBTFGATA1RBM14ATF7NEUROD1ZNF316ZBTB7AKDM4ASMARCA4ZNF579TRIM22ZFP91RAD21HDAC1CTBP1SKILE4F1ATF7NRF1L3MBTL2ARNTSMC3PRDM10E2F1ATF2ESRRANBNKDM5ARNF2NR2F1NCOA1RB1CC2D1ASMARCA5ZNF143MAXBRD9RXRAARID3ANCOR1SOX6BCORTBPTBL1XR1MLLT1RCOR1YY1GABPAEHMT2KLF16JUNDRESTPOU2F2GATA3FOXA1TCF12ZNF207CHD1ARID2RFX5TAF1TRIM28
MRPL39GH21J025626-21:25626594:AT:A0.3469Enhancer71-eQTLs,Distancechr21:25626531-25627507ENSR21_8QC9F
NR2F2EP300NFICNFIB
MRPL39GH21J025638-21:25639146:T:A1.3633Promoter/Enhancer506EliteeQTLs,C-HiCchr21:25638356-25641000ENSR21_B74DC, ENSR21_C4JNQ, ENSR21_582SF2, JAM2_2, JAM2_3
RFX1RNF2TRIM22ARNTCEBPBMEF2AMEF2CEP300L3MBTL2MXI1TBX21CTCFPOLR2AZNF384MAXELK1PHF8SMARCA4ASH2LZNF143EGR1EZH2CTCFSRFIKZF1POLR2AHNRNPKHNRNPLLTAF1SIN3ATAF15MXI1SMARCA5CHD1YY1TAF7RBBP5RAD21TRIM22ZNF263SMC3EEDZNF207KDM4AGATAD2BRB1BHLHE40HDAC2CREML3MBTL2TRIM28CBFBMEF2BYY1POLR2ACBX2USF1RNF2
MRPL39GH21J025670-21:25670381:T:C0.5342Enhancer36-eQTLschr21:25670368-25671186ENSR21_9D74X
NR2F2EP300JUNDFOSMAFF
MRPL39GH21J025699-21:25699528:C:A0.4492Enhancer56-eQTLschr21:25699268-25700178ENSR21_9D7FB
EGR1ZNF384JUNDMAFKFOS
MRPL39GH21J025717-None0.0000Enhancer143-C-HiCchr21:25717648-25717778-
SMARCA4ATF7DPF2NFICSMARCC2ZNF316NFIBARID1BHMBOX1JUNMAFFATF2C11orf30ATF3CEBPBJUNDNFE2ATF4
MRPL39GH21J025732-21:25732939:G:A0.4805Promoter/Enhancer656EliteeQTLschr21:25732461-25737935ENSR21_9D7R4, ENSR21_9D7R9, ENSR21_9D7RD, ENSR21_73HT6R, ENSR21_9D7RJ, ENSR21_583FR6, ENSR21_B74WC, ATP5J_1, GABPA_2, GABPA_1, ATP5J_2
MLLT1ZBTB33TBPRAD51FOXK2ESRRAPOLR2AUSF1AFF1SMARCA4NR2F1NBNBCORHDAC2IKZF1SMARCA5ZNF24MITFSMARCE1MLLT1ZNF184ZNF407CEBPBZSCAN29LEF1SMARCA5CHAMP1ARNTSMARCA4ARID1BARID2NFXL1PKNOX1NFICMNTZZZ3ARHGAP35SIN3ANCOR1FOXK2NR2C1HDAC1GMEB1NCOA2CTCFHDAC3TRIP13MXI1RBFOX2ARID3ATBPMAXMYCATF3HMBOX1NR2F6YY1ZFXBHLHE40HNF4GHNF4AJUNDNCOR1RXRARBM22PHF8POLR2GBRD4AGO2POLR2AGABPB1SAP30SMARCE1MLLT1ZNF184SIN3ARNF2IRF3FIP1L1KDM5BHNRNPLHNRNPLLHDAC6AGO1SMAD5ZBTB40EP300RUNX1MEF2AMBD2ASH2LZNF143ESRRAPCBP1EGR1GABPATAF9BETS1MXI1TAF1IRF1MAXSETDB1RESTTBPSP1SKILEP400ELF4MYCPMLTCF12ELF1SOX6ZBED1E2F6AGO2NFICCBX1RLFSMAD1MYBNRF1MNTPOU2F2NR2C1MEIS2ZHX1TRIM28RBM39TEAD4YY1KDM1AZBTB11TBL1XR1ZNF639E4F1ATF2ARID3AKDM5AUBTFMEF2CCTBP1PAX5ELK1HCFC1TBX3USF2ZNF316RAD51ETV4NFYBJUNDZNF444CBX5NR2F2CEBPBHNF4AZNF687ESR1PKNOX1RCOR1SUZ12BHLHE40CHD1TRIM24STAT5ACUX1CREMTHAP1ZBTB7ARFX5SKINEUROD1ZNF24ZNF407NCOA1ZBTB33FOXK2IKZF1XRCC5C11orf30IRF4ATF3ZHX2NFRKBZNF592ZKSCAN1E2F8ATF7FOXA1DEAF1ASH1LTCF7RXRASRFCREB1KDM4BZBTB2SPI1GMEB1MTA2HNF4GIKZF2FOXA2WRNIP1PRDM10ZNF217FOSL2MEF2BARNTNFATC3MAFKGATAD2BPHF20HSF1RUNX3E2F1NR2C2MITFSMC3ZNF574RBM22SIN3BZEB2BRCA1SIX5ZNF263CBX3RELBDPF2STAT1LCORLZSCAN29ZNF318AFF1MTA3SAP30CDC5LZBTB8ACHAMP1ZNF207KLF5ARID1BMLLT1NBNTRIM22ZFP91RUNX3ZNF184ZFXKLF16CLOCKTBX21PRPF4SIX5RBBP5SMARCA4USF1IRF3ZEB2MXI1RB1AGO2L3MBTL2PTBP1CREB3L1CBFA2T3KDM4ABHLHE40EGR1PYGO2E2F6TAF15PCBP1RBM39MGAHNRNPKRUNX1TCF7JUNDFOXM1BACH1SAFBZBTB11ELF1FOXK2CREMFOXA1SIX5KDM5BZBTB7ATBPEGR1MIER1HMBOX1RLFDPF2LEF1MAFKSMARCC2DNMT1MXI1RAD21MLLT1ATF7GATA1CTBP1HDAC2MYCRNF2IRF1ZSCAN29SMARCA4SOX6ARID1BHDAC1NCOR1TCF12UBTFBHLHE40KLF16RCOR1TCF7KDM1ATAL1CEBPBCBFA2T3TEAD4GATAD2BTAL1PKNOX1
MRPL39GH21J025756-21:25757041:T:G1.6068Enhancer1-eQTLschr21:25756981-25758549--
MRPL39GH21J025801-21:25801841:G:A0.2701Enhancer265EliteeQTLschr21:25801400-25802000ENSR21_B758T, ENSR21_583T6J
CTCFRESTKDM4AZSCAN29MTA3NRF1L3MBTL2MNTRB1ZNF592SOX6SP1YY1STAT1TRIM22MAXRNF2BHLHE40ZNF444ZNF24MYCPAX5CREMTBPHNF4ACBX3RAD21ZNF263JUNDTEAD4RUNX3ZBTB2CEBPBZNF143SMC3ZKSCAN1ARID3AJUNBFOSL2ZNF384KLF16SMARCA5GABPB1SMARCA4GATA3CC2D1AMLLT1CBX5EP300PBX3XRCC5NCOR1MAFKC11orf30ARID1BZNF316MAFFPOLR2AZNF184
MRPL39GH21J025818-21:25818340:C:T0.5527Enhancer71EliteeQTLschr21:25818081-25818862--
MRPL39GH21J025881-21:25882009:C:A0.5652Enhancer205EliteeQTLschr21:25881909-25882059ENSR21_584CWZ
CTCFHNF4ASMC3TRIM22ZNF143XRCC5RAD21YY1CBX1RXRACREMRUNX3RB1ZNF207REST
MRPL39GH21J025883-21:25886486:T:C0.6276Enhancer56-eQTLschr21:25883822-25886591ENSR21_73J4MP
NR2F2EP300FOS
MRPL39GH21J025914-21:25915612:G:A0.0307Enhancer1-eQTLschr21:25914691-25916260-
POLR2A
MRPL39GH21J025931-21:25931361:G:A0.0026Enhancer63EliteeQTLschr21:25931200-25931400--
MRPL39GH21J026021-None0.0000Promoter94-Distancechr21:26021927-26021987MRPL39_2-