GWAS Annotated: CA10

Gene: carbonic anhydrase 10

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
CA10GH17J051636-None0.0000Enhancer41-Distancechr17:51636946-51637088-
CTCFATF2
CA10GH17J051640-None0.0000Enhancer193-Distancechr17:51640219-51640309ENSR17_BD8P5
CTCFTRIM22ZNF263ZNF143ZNF24TRIM28YY1RAD21ZNF8SMC3GATA3CTBP1TCF12GABPAETS1FOSRESTZHX2KDM1AATF3C11orf30BACH1ZBTB33DPF2ELF1MAFKFOXA1ATF7CREB1
CA10GH17J051649-None0.0000Enhancer14-Distancechr17:51649802-51649885-
RCOR1
CA10GH17J051696-17:51697079:C:T0.5722Enhancer46-eRNA_co-expression,Distancechr17:51696875-51697089-
MAFK
CA10GH17J051703-17:51703859:C:T1.9514Enhancer222-Distancechr17:51703129-51703950ENSR17_BD939
RXRAHNF4AZNF263YY1ATF3EP300FOXA2NR2F2ZBTB33JUNDRAD21RXRAHNF4ATAF1FOSMYCSP1RESTSTAT3ESR1
CA10GH17J051707-17:51707469:G:A0.8154Enhancer117-Distancechr17:51707360-51707470ENSR17_9QJ5M
FOSGATA3JUNDCTBP1NEUROD1ESR1JUNDPF2FOXA1SMARCE1STAT3
CA10GH17J051709-17:51709676:C:A0.8794Enhancer117-Distancechr17:51709646-51710543-
ZBTB33MAXYY1HNF4ARESTJUNDRXRASP1EP300FOSATF3
CA10GH17J051739-None0.0000Enhancer158-Distancechr17:51739260-51739410-
EP300TRIM28ZNF263
CA10GH17J051740-None0.0000Enhancer158-Distancechr17:51739440-51739650-
EP300TRIM28ZNF263NANOG
CA10GH17J051745-17:51746063:C:A0.7743Enhancer126-Distancechr17:51745887-51747111ENSR17_9QJJT
TRIM28DPF2GATA3MLLT1CUX1RCOR1RESTFOXA1PKNOX1GATA2FOSTAF1
CA10GH17J051748-17:51748994:G:C0.8969Enhancer1-Distancechr17:51748302-51749721-
ZFXCREB1STAT3FOS
CA10GH17J051883-None0.0000Enhancer6-Distancechr17:51883322-51883332--
CA10GH17J051904-None0.0000Enhancer17-eRNA_co-expression,Distancechr17:51904194-51904204--
CA10GH17J051905-17:51906025:C:T0.7507Enhancer6-eRNA_co-expression,Distancechr17:51905756-51906115-
GATA3GATA2
CA10GH17J051913-None0.0000Enhancer1-Distancechr17:51913080-51913230-
YY1
CA10GH17J051933-17:51933012:C:A1.1787Enhancer1-eQTLs,Distancechr17:51933004-51934326--
CA10GH17J051947-None0.0000Enhancer6-eRNA_co-expression,Distancechr17:51947221-51947240-
FOXA2
CA10GH17J051959-None0.0000Enhancer23-eRNA_co-expression,Distancechr17:51959460-51959850-
SMARCA4
CA10GH17J052026-17:52027122:G:A1.5707Enhancer71-Distancechr17:52026725-52028370ENSR17_9QMKC
CTCFFOSSTAT3FOSL2JUNDCREB1FOS
CA10GH17J052056-17:52056772:T:C1.7572Enhancer9-eRNA_co-expression,Distancechr17:52056690-52057042--
CA10GH17J052064-17:52065624:C:T0.2558Enhancer1-Distancechr17:52064417-52065785ENSR17_9QMZ5-
CA10GH17J052100-17:52100490:T:C0.7295Enhancer6-eRNA_co-expression,Distancechr17:52100342-52100676--
CA10GH17J052102-None0.0000Enhancer6-Distancechr17:52102663-52102878--
CA10GH17J052145-None0.0000Enhancer36-Distancechr17:52145600-52145790ENSR17_9QNSG
ZNF574FOS
CA10GH17J052146-17:52147538:T:C6.6610Enhancer192EliteDistancechr17:52146767-52150085ENSR17_9QNT2, ENSR17_9QNT6, ENSR17_83JDPW
ATF7RUNX3EP300SPI1FOSFOSGABPAPOLR2AMAXZBTB33YY1RESTSP1RXRAMYCSTAT3HNF4AJUNDFOXA2FOXA1ATF3FOSEGR1
CA10GH17J052156-None0.0000Enhancer9-eRNA_co-expression,Distancechr17:52156729-52156892--
CA10GH17J052160-None0.0000Promoter149-Distancechr17:52158121-52158181CA10_1
EZH2SUZ12ASH2LMXI1RNF2GATA2RBBP5
CA10GH17J052158-None0.0000Promoter/Enhancer237EliteDistancechr17:52158674-52158830ENSR17_9QNZ6, ENSR17_9QNZ9, ENSR17_5G98JK, CA10_2
EZH2ASH2LRNF2RBBP5ZFXCTCFRAD21SMC3KDM5AZEB1TCF12ZNF263EGR1REST
CA10GH17J052159-None0.0000Promoter94-Distancechr17:52159997-52160057CA10_3
EZH2SUZ12